Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797032.1_cds_XP_016452904.1_4667
CDS Infomation

[gene=LOC107777387] [db_xref=GeneID:107777387] [protein=pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like isoform X2] [protein_id=XP_016452904.1] [location=complement(join(25004..25079,27945..28975))] [gbkey=CDS]
Sequence

ATGAACAGGAGAGCAAGAGCTGCATCAAAGCCTGTTCTTGACGAATCCCGATTTCAAAGG
GCTGTAACTCAGCTTCCACCTAGATTTACTCCTGAAGAACTGAGGGATGTCATGACTTCA
GAAAATGATCCTTTAGTGTGTTTGGAGTTGTTTAATTGGGCGTCGAAACAGCACAGGTTT
AGGCATGATGTTTCGACGTATCATGTTGCTATACAACGGCTTGGTGAAGCGAAAATGTAT
GAAGAAATGGATCATATTGTTAATCAAGTACTTGCCGTTCCATCTATTGGGTCCGAGGCG
CTTTTCAATTCGATGATTTATTATTTCACGGAAGCTAGGAAGTTGACTCGAGCAGTGATG
ATATATAAGCATATGTTAAATAGTAGGAAATTGGATTGTAGGCCGTCGATTAAAACTTAT
AATATTCTTTTCGCGGCTCTTCTTAGTAGGAGGAATAATTCGTATATAAATCACATGTAT
ATGGATACTATAAGGTCTCTCTTCAAGCAAATGGTCGATAATGGGATTGAACCAGATATC
TTTTCCTTGAATACCATGATAAAAGGGTATGTGCTTTCGCTTCATGTCAATGATGCCCTT
AGGGTATTTCACCAAATGGGTGTGGTTTACCAGTGCCAGCCCAACTCATTTTCATATGAT
TATCTGATCCACGGGTTATGTGCGCAAGGACGAACAAAGAATGCTAAGGAAATTTATGAT
AAGATGAAGTGCAAAGCATTCATACCTAGTAGTAAATCGTACAACTCGCTGGTGAACTCC
TTGGCTCTTGGCGGAGAGGTTGATGAGGCAGTGAAATTCATGTGGGAGATGAACGAAAAC
CGAAGAACAATTGACTTCATCACCTTCCGAACAGTAATTGATGAAGTCTGCCGGCAAACA
AGTGTGAAAGACGCCATTGGCTTGTTGAAGGAGTTGCAAAATAAGGACATCATCGATGGT
CTTACTCATAGCAAGCTTCTGTGTGAACTTGAGGATGATGTTCATAATTTAAATGTCAGA
AATCGGTACAGGTTTCATGCAGCATGGACCCTAATTTATGTTGGGGTAGCAAAAAAATAT
CTGGTTTTTCATGGAAATGAGAGATAG

Peptide Sequence

PEP ID

XP_016452904.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MNRRARAASKPVLDESRFQRAVTQLPPRFTPEELRDVMTSENDPLVCLELFNWASKQHRF
RHDVSTYHVAIQRLGEAKMYEEMDHIVNQVLAVPSIGSEALFNSMIYYFTEARKLTRAVM
IYKHMLNSRKLDCRPSIKTYNILFAALLSRRNNSYINHMYMDTIRSLFKQMVDNGIEPDI
FSLNTMIKGYVLSLHVNDALRVFHQMGVVYQCQPNSFSYDYLIHGLCAQGRTKNAKEIYD
KMKCKAFIPSSKSYNSLVNSLALGGEVDEAVKFMWEMNENRRTIDFITFRTVIDEVCRQT
SVKDAIGLLKELQNKDIIDGLTHSKLLCELEDDVHNLNVRNRYRFHAAWTLIYVGVAKKY
LVFHGNER

Transcript Sequence

Gene sequence data has not been registered.